Source code for pycif.utils.classes.chemistries

from types import MethodType

from ...utils.check.errclass import PluginError
from .baseclass import Plugin




class Chemistry(Plugin):


    @classmethod
    def register_plugin(cls, name, version, module, subtype="", **kwargs):
        """Register a module for a plugin and version with possibly options

        Args:
            name (str):  name of the plugin
            version (str):  version of the plugin
            module (types.ModuleType): module defining the interface
                between pyCIF and the plugin
            plugin_type (str): type of plugin
            **kwargs (dictionary): default options for module

        """

        super(Chemistry, cls).register_plugin(
            name, version, module, plugin_type="chemistry", subtype=subtype
        )




    def read_chemicalscheme(self, *args, **kwargs):
        """Read a chemical scheme from an existing file

        Args:
            self (Chemistry): plugin defining the chemistry. Should include
            dirscheme grid to be able to read the chemistry from files

        Return:
            Characteristics of the chemical scheme
        """
        raise PluginError("The function read_scheme was not defined")




    def create_chemicalscheme(self, *args, **kwargs):
        """Creates a chemical scheme if needed

        Args:
            chemistry (dictionary): dictionary defining the chelical scheme
        """
        raise PluginError("The function create_chemicalscheme was not defined")




    def initiate_template(self):
        super(Chemistry, self).initiate_template(
            plg_type="chemistry",
            default_functions={
                "read_chemicalscheme": True, "create_chemicalscheme": True}
        )