Define the “mapper” of your model

The mapper includes all information about the inputs and outputs of your model. Before going further, please consult the documentation page of the transform Plugins here, which explains what is the mapper.

Here, you will learn how to implement the mapper step by step.

• 1. Setting an empty mapper
• 2. Setting the mapper with output concentrations
• 3. Running the model executable
  • 3.1. compile
  • 3.2. make_auxiliary
  • 3.3. run
• 4. Setting the mapper with input fluxes