1rootdir: &rootdir /tmp/CIF/
2outdir: &outdir /home/chimereicos/pycif_testout/aberchet/76fc3ffebd5e4f251d56d47f5e1c438a2e3e0e1e
3verbose: 2
4logfile: pycif.logtest
5workdir: !join [*outdir, /fwd_short_setup_isotopes]
6datei: 2000-01-01 00:00:00
7datef: 2000-02-01 00:00:00
8mode:
9 plugin:
10 name: forward
11 version: std
12obsoperator:
13 autorestart: true
14 plugin:
15 name: standard
16 version: std
17platform:
18 cores: 10
19 plugin:
20 name: LSCE
21 version: obelix
22 queue: mediump
23model:
24 file_controle: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes/restart/restart_1998.nc
25 file_vcoord: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes/restart/restart_1998.nc
26 fileexec: !join [*rootdir, /model_sources/DISPERSION_gch/dispersion.e]
27 plugin:
28 name: LMDZ
29 version: std
30chemistry:
31 file_yaml: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//chem_schemes/d13_scheme_ccrt.yml
32obsvect:
33 dump: true
34 plugin:
35 name: standard
36 version: std
37 transform_pipe:
38 trans1:
39 component:
40 - concs
41 - concs
42 parameters_in:
43 names:
44 - 12CH4
45 - 13CH4
46 parameters_out:
47 d13C:
48 isotopologues:
49 - 13CH4
50 refs:
51 - 12CH4
52 standard: 0.0112372
53 iso_mass:
54 - 16.031
55 - 17.035
56 names:
57 - d13C
58 - CH4
59 spec_mass: 16.0425
60 plugin:
61 name: conc2ratio
62 type: transform
63 version: std
64 unit: volume
65 wfunc: true
66controlvect:
67 plugin:
68 name: standard
69 version: std
70 transform_pipe:
71 trans1:
72 component:
73 - isoinicond
74 - inicond
75 parameters_in:
76 names:
77 - d13C
78 - CH4
79 parameters_out:
80 d13C:
81 standard: 0.0112372
82 iso_mass:
83 - 16.031
84 - 17.035
85 names:
86 - 12CH4
87 - 13CH4
88 spec_mass: 16.0425
89 plugin:
90 name: ratio2conc
91 type: transform
92 version: std
93 unit: mass
94 trans2:
95 component:
96 - isosignatures
97 - fluxes
98 parameters_in:
99 names:
100 - d13C_biof
101 - CH4_biof
102 parameters_out:
103 d13C_biof:
104 standard: 0.0112372
105 iso_mass:
106 - 16.031
107 - 17.035
108 names:
109 - 12CH4_biof
110 - 13CH4_biof
111 spec_mass: 16.0425
112 plugin:
113 name: ratio2conc
114 type: transform
115 version: std
116 unit: mass
117 trans3:
118 component:
119 - isosignatures
120 - fluxes
121 parameters_in:
122 names:
123 - d13C_bioge
124 - CH4_bioge
125 parameters_out:
126 d13C_bioge:
127 standard: 0.0112372
128 iso_mass:
129 - 16.031
130 - 17.035
131 names:
132 - 12CH4_bioge
133 - 13CH4_bioge
134 spec_mass: 16.0425
135 plugin:
136 name: ratio2conc
137 type: transform
138 version: std
139 unit: mass
140 trans4:
141 component:
142 - isosignatures
143 - fluxes
144 parameters_in:
145 names:
146 - d13C_fossil
147 - CH4_fossil
148 parameters_out:
149 d13C_fossil:
150 standard: 0.0112372
151 iso_mass:
152 - 16.031
153 - 17.035
154 names:
155 - 12CH4_fossil
156 - 13CH4_fossil
157 spec_mass: 16.0425
158 plugin:
159 name: ratio2conc
160 type: transform
161 version: std
162 unit: mass
163 trans5:
164 component:
165 - isosignatures
166 - fluxes
167 parameters_in:
168 names:
169 - d13C_others
170 - CH4_others
171 parameters_out:
172 d13C_others:
173 standard: 0.0112372
174 iso_mass:
175 - 16.031
176 - 17.035
177 names:
178 - 12CH4_others
179 - 13CH4_others
180 spec_mass: 16.0425
181 plugin:
182 name: ratio2conc
183 type: transform
184 version: std
185 unit: mass
186 trans6:
187 component:
188 - isosignatures
189 - fluxes
190 parameters_in:
191 names:
192 - d13C_wet
193 - CH4_wet
194 parameters_out:
195 d13C_wet:
196 standard: 0.0112372
197 iso_mass:
198 - 16.031
199 - 17.035
200 names:
201 - 12CH4_wet
202 - 13CH4_wet
203 spec_mass: 16.0425
204 plugin:
205 name: ratio2conc
206 type: transform
207 version: std
208 unit: mass
209 trans7:
210 component: fluxes
211 parameter_out: 12CH4
212 parameters_in:
213 - 12CH4_biof
214 - 12CH4_bioge
215 - 12CH4_fossil
216 - 12CH4_others
217 - 12CH4_wet
218 plugin:
219 name: families
220 type: transform
221 version: std
222 trans8:
223 component: fluxes
224 parameter_out: 13CH4
225 parameters_in:
226 - 13CH4_biof
227 - 13CH4_bioge
228 - 13CH4_fossil
229 - 13CH4_others
230 - 13CH4_wet
231 plugin:
232 name: families
233 type: transform
234 version: std
235datavect:
236 components:
237 concs:
238 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//monitor/
239 file: monitor_filtered_rsd_new.nc
240 file_statlev: ${PYCIF_DATATEST}/LMDZ//simple/stations_levels_LMDZ39lev.txt
241 parameters:
242 CH4: {}
243 d13C: {}
244 dD: {}
245 fluxes:
246 file_freq: 1MS
247 parameters:
248 CH4_biof:
249 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
250 err: 1
251 file: fch4.biofuels_biomass_%Y_LMDz9026vector_totCH4.nc
252 hresol: hpixels
253 plugin:
254 name: LMDZ
255 type: fluxes
256 version: sflx
257 tresol: 1MS
258 tsubresol: 10D
259 varname: flx_ch4
260 vresol: vpixels
261 CH4_bioge:
262 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
263 err: 1
264 file: fch4.biogenic_%Y_LMDz9026vector_totCH4.nc
265 hresol: hpixels
266 plugin:
267 name: LMDZ
268 type: fluxes
269 version: sflx
270 tresol: 1MS
271 tsubresol: 10D
272 varname: flx_ch4
273 vresol: vpixels
274 CH4_fossil:
275 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
276 err: 1
277 file: fch4.fossil_%Y_LMDz9026vector_totCH4.nc
278 hresol: hpixels
279 plugin:
280 name: LMDZ
281 type: fluxes
282 version: sflx
283 tresol: 1MS
284 tsubresol: 10D
285 varname: flx_ch4
286 vresol: vpixels
287 CH4_others:
288 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
289 err: 1
290 file: fch4.others_%Y_LMDz9026vector_totCH4.nc
291 hresol: hpixels
292 plugin:
293 name: LMDZ
294 type: fluxes
295 version: sflx
296 tresol: 1MS
297 tsubresol: 10D
298 varname: flx_ch4
299 vresol: vpixels
300 CH4_wet:
301 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
302 err: 1
303 file: fch4.wetlands_%Y_LMDz9026vector_totCH4.nc
304 hresol: hpixels
305 plugin:
306 name: LMDZ
307 type: fluxes
308 version: sflx
309 tresol: 1MS
310 tsubresol: 10D
311 varname: flx_ch4
312 vresol: vpixels
313 inicond:
314 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//restart/
315 file: restart_1998.nc
316 parameters:
317 CH4:
318 bands_lat:
319 - -90.1
320 - -60
321 - -30
322 - 0
323 - 30
324 - 60
325 - 90.1
326 bands_lon:
327 - -180.1
328 - -150
329 - -120
330 - -90
331 - -60
332 - -30
333 - 0
334 - 30
335 - 60
336 - 90
337 - 120
338 - 150
339 - 180.1
340 calcstd: false
341 err: 0.1
342 hresol: bands
343 plugin:
344 name: LMDZ
345 type: fields
346 version: ic
347 restart_id: 1
348 isoinicond:
349 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//restart/
350 file: restart_1998.nc
351 parameters:
352 d13C:
353 bands_lat:
354 - -90.1
355 - -60
356 - -30
357 - 0
358 - 30
359 - 60
360 - 90.1
361 bands_lon:
362 - -180.1
363 - -150
364 - -120
365 - -90
366 - -60
367 - -30
368 - 0
369 - 30
370 - 60
371 - 90
372 - 120
373 - 150
374 - 180.1
375 calcstd: false
376 err: 0.03
377 hresol: bands
378 plugin:
379 name: LMDZ
380 type: fields
381 version: ic
382 restart_id: 3
383 isosignatures:
384 file_freq: 1MS
385 parameters:
386 d13C_biof:
387 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
388 err: 0.4
389 file: biofuels_biomass_%Y_LMDz9026vector.nc
390 hresol: regions
391 plugin:
392 name: LMDZ
393 type: fluxes
394 version: sflx
395 regions_infos:
396 dir: ${PYCIF_DATATEST}/LMDZ/
397 file: 10_regions.nc
398 tresol: 1MS
399 tsubresol: 10D
400 varname: sign_d13c
401 d13C_bioge:
402 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
403 err: 0.4
404 file: biogenic_%Y_LMDz9026vector.nc
405 hresol: regions
406 plugin:
407 name: LMDZ
408 type: fluxes
409 version: sflx
410 regions_infos:
411 dir: ${PYCIF_DATATEST}/LMDZ/
412 file: 10_regions.nc
413 tresol: 1MS
414 tsubresol: 10D
415 varname: sign_d13c
416 d13C_fossil:
417 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
418 err: 0.4
419 file: fossil_%Y_LMDz9026vector.nc
420 hresol: regions
421 plugin:
422 name: LMDZ
423 type: fluxes
424 version: sflx
425 regions_infos:
426 dir: ${PYCIF_DATATEST}/LMDZ/
427 file: 10_regions.nc
428 tresol: 1MS
429 tsubresol: 10D
430 varname: sign_d13c
431 d13C_others:
432 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
433 err: 0.4
434 file: others_%Y_LMDz9026vector.nc
435 hresol: regions
436 plugin:
437 name: LMDZ
438 type: fluxes
439 version: sflx
440 regions_infos:
441 dir: ${PYCIF_DATATEST}/LMDZ/
442 file: 10_regions.nc
443 tresol: 1MS
444 tsubresol: 10D
445 varname: sign_d13c
446 d13C_wet:
447 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
448 err: 0.4
449 file: wetlands_%Y_LMDz9026vector.nc
450 hresol: regions
451 plugin:
452 name: LMDZ
453 type: fluxes
454 version: sflx
455 regions_infos:
456 dir: ${PYCIF_DATATEST}/LMDZ/
457 file: 10_regions.nc
458 tresol: 1MS
459 tsubresol: 10D
460 varname: sign_d13c
461 kinetic:
462 dir: ${PYCIF_DATATEST}/LMDZ//simple/kinetic/
463 file: TransCom.vmr.new.m%m.nc
464 file_freq: 1MS
465 plugin:
466 name: LMDZ
467 type: fields
468 version: photochem
469 meteo:
470 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//meteo/
471 file_freq: 1MS
472 plugin:
473 name: LMDZ
474 version: mass-fluxes
475 prescrconcs:
476 file_freq: 1MS
477 parameters:
478 Cl:
479 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fields/
480 file: CM5A2CHT_DM_%Y_m%m.nc
481 O1D:
482 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fields/
483 file: CM5A2CHT_DM_%Y_m%m.nc
484 OH:
485 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fields/
486 file: CM5A2CHT_DM_%Y_m%m.nc
487 plugin:
488 name: LMDZ
489 type: fields
490 version: prescrconcs
491 plugin:
492 name: standard
493 version: std
494domain:
495 dir_vcoord: ${PYCIF_DATATEST}/LMDZ/simple/restart/
496 file_vcoord: restart_2012-01_ch4_d13c.nc
497 filegrid: ${PYCIF_DATATEST}/LMDZ//grid_LMDZ96_96.txt
498 nlat: 96
499 nlev: 39
500 nlon: 97
501 plugin:
502 name: LMDZ
503 version: std
504 type: deg
505 xmax: 180
506 xmin: -180
507 ymax: 90
508 ymin: -90