1rootdir: &rootdir /tmp/CIF/
2outdir: &outdir /home/chimereicos/pycif_testout/aberchet/f91384f813b43bc91715564aa3cfb72c4c39dfdf
3verbose: 2
4logfile: pycif.logtest
5workdir: !join [*outdir, /adjtltest_short_setup_isotopes_rand-incr_control-testspace_fullperiod]
6datei: 2000-01-01 00:00:00
7datef: 2000-02-01 00:00:00
8mode:
9 increments: 0.2
10 incrmode: rand
11 plugin:
12 name: adj-tl_test
13 version: std
14 testspace: control
15obsoperator:
16 autorestart: true
17 plugin:
18 name: standard
19 version: std
20platform:
21 cores: 10
22 plugin:
23 name: LSCE
24 version: obelix
25 queue: mediump
26model:
27 file_controle: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes/restart/restart_1998.nc
28 file_vcoord: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes/restart/restart_1998.nc
29 fileexec: !join [*rootdir, /model_sources/DISPERSION_gch/dispersion.e]
30 plugin:
31 name: LMDZ
32 version: std
33chemistry:
34 file_yaml: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//chem_schemes/d13_scheme_ccrt.yml
35obsvect:
36 dump: true
37 plugin:
38 name: standard
39 version: std
40 transform_pipe:
41 trans1:
42 component:
43 - concs
44 - concs
45 parameters_in:
46 names:
47 - 12CH4
48 - 13CH4
49 parameters_out:
50 d13C:
51 isotopologues:
52 - 13CH4
53 refs:
54 - 12CH4
55 standard: 0.0112372
56 iso_mass:
57 - 16.031
58 - 17.035
59 names:
60 - d13C
61 - CH4
62 spec_mass: 16.0425
63 plugin:
64 name: conc2ratio
65 type: transform
66 version: std
67 unit: volume
68 wfunc: true
69controlvect:
70 plugin:
71 name: standard
72 version: std
73 transform_pipe:
74 trans1:
75 component:
76 - isoinicond
77 - inicond
78 parameters_in:
79 names:
80 - d13C
81 - CH4
82 parameters_out:
83 d13C:
84 standard: 0.0112372
85 iso_mass:
86 - 16.031
87 - 17.035
88 names:
89 - 12CH4
90 - 13CH4
91 spec_mass: 16.0425
92 plugin:
93 name: ratio2conc
94 type: transform
95 version: std
96 unit: mass
97 trans2:
98 component:
99 - isosignatures
100 - fluxes
101 parameters_in:
102 names:
103 - d13C_biof
104 - CH4_biof
105 parameters_out:
106 d13C_biof:
107 standard: 0.0112372
108 iso_mass:
109 - 16.031
110 - 17.035
111 names:
112 - 12CH4_biof
113 - 13CH4_biof
114 spec_mass: 16.0425
115 plugin:
116 name: ratio2conc
117 type: transform
118 version: std
119 unit: mass
120 trans3:
121 component:
122 - isosignatures
123 - fluxes
124 parameters_in:
125 names:
126 - d13C_bioge
127 - CH4_bioge
128 parameters_out:
129 d13C_bioge:
130 standard: 0.0112372
131 iso_mass:
132 - 16.031
133 - 17.035
134 names:
135 - 12CH4_bioge
136 - 13CH4_bioge
137 spec_mass: 16.0425
138 plugin:
139 name: ratio2conc
140 type: transform
141 version: std
142 unit: mass
143 trans4:
144 component:
145 - isosignatures
146 - fluxes
147 parameters_in:
148 names:
149 - d13C_fossil
150 - CH4_fossil
151 parameters_out:
152 d13C_fossil:
153 standard: 0.0112372
154 iso_mass:
155 - 16.031
156 - 17.035
157 names:
158 - 12CH4_fossil
159 - 13CH4_fossil
160 spec_mass: 16.0425
161 plugin:
162 name: ratio2conc
163 type: transform
164 version: std
165 unit: mass
166 trans5:
167 component:
168 - isosignatures
169 - fluxes
170 parameters_in:
171 names:
172 - d13C_others
173 - CH4_others
174 parameters_out:
175 d13C_others:
176 standard: 0.0112372
177 iso_mass:
178 - 16.031
179 - 17.035
180 names:
181 - 12CH4_others
182 - 13CH4_others
183 spec_mass: 16.0425
184 plugin:
185 name: ratio2conc
186 type: transform
187 version: std
188 unit: mass
189 trans6:
190 component:
191 - isosignatures
192 - fluxes
193 parameters_in:
194 names:
195 - d13C_wet
196 - CH4_wet
197 parameters_out:
198 d13C_wet:
199 standard: 0.0112372
200 iso_mass:
201 - 16.031
202 - 17.035
203 names:
204 - 12CH4_wet
205 - 13CH4_wet
206 spec_mass: 16.0425
207 plugin:
208 name: ratio2conc
209 type: transform
210 version: std
211 unit: mass
212 trans7:
213 component: fluxes
214 parameter_out: 12CH4
215 parameters_in:
216 - 12CH4_biof
217 - 12CH4_bioge
218 - 12CH4_fossil
219 - 12CH4_others
220 - 12CH4_wet
221 plugin:
222 name: families
223 type: transform
224 version: std
225 trans8:
226 component: fluxes
227 parameter_out: 13CH4
228 parameters_in:
229 - 13CH4_biof
230 - 13CH4_bioge
231 - 13CH4_fossil
232 - 13CH4_others
233 - 13CH4_wet
234 plugin:
235 name: families
236 type: transform
237 version: std
238datavect:
239 components:
240 concs:
241 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//monitor/
242 file: monitor_filtered_rsd_new.nc
243 file_statlev: ${PYCIF_DATATEST}/LMDZ//simple/stations_levels_LMDZ39lev.txt
244 parameters:
245 CH4: {}
246 d13C: {}
247 dD: {}
248 fluxes:
249 file_freq: 1MS
250 parameters:
251 CH4_biof:
252 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
253 err: 1
254 file: fch4.biofuels_biomass_%Y_LMDz9026vector_totCH4.nc
255 hresol: hpixels
256 plugin:
257 name: LMDZ
258 type: fluxes
259 version: sflx
260 tresol: 1MS
261 tsubresol: 10D
262 varname: flx_ch4
263 vresol: vpixels
264 CH4_bioge:
265 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
266 err: 1
267 file: fch4.biogenic_%Y_LMDz9026vector_totCH4.nc
268 hresol: hpixels
269 plugin:
270 name: LMDZ
271 type: fluxes
272 version: sflx
273 tresol: 1MS
274 tsubresol: 10D
275 varname: flx_ch4
276 vresol: vpixels
277 CH4_fossil:
278 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
279 err: 1
280 file: fch4.fossil_%Y_LMDz9026vector_totCH4.nc
281 hresol: hpixels
282 plugin:
283 name: LMDZ
284 type: fluxes
285 version: sflx
286 tresol: 1MS
287 tsubresol: 10D
288 varname: flx_ch4
289 vresol: vpixels
290 CH4_others:
291 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
292 err: 1
293 file: fch4.others_%Y_LMDz9026vector_totCH4.nc
294 hresol: hpixels
295 plugin:
296 name: LMDZ
297 type: fluxes
298 version: sflx
299 tresol: 1MS
300 tsubresol: 10D
301 varname: flx_ch4
302 vresol: vpixels
303 CH4_wet:
304 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fluxes/
305 err: 1
306 file: fch4.wetlands_%Y_LMDz9026vector_totCH4.nc
307 hresol: hpixels
308 plugin:
309 name: LMDZ
310 type: fluxes
311 version: sflx
312 tresol: 1MS
313 tsubresol: 10D
314 varname: flx_ch4
315 vresol: vpixels
316 inicond:
317 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//restart/
318 file: restart_1998.nc
319 parameters:
320 CH4:
321 bands_lat:
322 - -90.1
323 - -60
324 - -30
325 - 0
326 - 30
327 - 60
328 - 90.1
329 bands_lon:
330 - -180.1
331 - -150
332 - -120
333 - -90
334 - -60
335 - -30
336 - 0
337 - 30
338 - 60
339 - 90
340 - 120
341 - 150
342 - 180.1
343 calcstd: false
344 err: 0.1
345 hresol: bands
346 plugin:
347 name: LMDZ
348 type: fields
349 version: ic
350 restart_id: 1
351 isoinicond:
352 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//restart/
353 file: restart_1998.nc
354 parameters:
355 d13C:
356 bands_lat:
357 - -90.1
358 - -60
359 - -30
360 - 0
361 - 30
362 - 60
363 - 90.1
364 bands_lon:
365 - -180.1
366 - -150
367 - -120
368 - -90
369 - -60
370 - -30
371 - 0
372 - 30
373 - 60
374 - 90
375 - 120
376 - 150
377 - 180.1
378 calcstd: false
379 err: 0.03
380 hresol: bands
381 plugin:
382 name: LMDZ
383 type: fields
384 version: ic
385 restart_id: 3
386 isosignatures:
387 file_freq: 1MS
388 parameters:
389 d13C_biof:
390 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
391 err: 0.4
392 file: biofuels_biomass_%Y_LMDz9026vector.nc
393 hresol: regions
394 plugin:
395 name: LMDZ
396 type: fluxes
397 version: sflx
398 regions_infos:
399 dir: ${PYCIF_DATATEST}/LMDZ/
400 file: 10_regions.nc
401 tresol: 1MS
402 tsubresol: 10D
403 varname: sign_d13c
404 d13C_bioge:
405 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
406 err: 0.4
407 file: biogenic_%Y_LMDz9026vector.nc
408 hresol: regions
409 plugin:
410 name: LMDZ
411 type: fluxes
412 version: sflx
413 regions_infos:
414 dir: ${PYCIF_DATATEST}/LMDZ/
415 file: 10_regions.nc
416 tresol: 1MS
417 tsubresol: 10D
418 varname: sign_d13c
419 d13C_fossil:
420 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
421 err: 0.4
422 file: fossil_%Y_LMDz9026vector.nc
423 hresol: regions
424 plugin:
425 name: LMDZ
426 type: fluxes
427 version: sflx
428 regions_infos:
429 dir: ${PYCIF_DATATEST}/LMDZ/
430 file: 10_regions.nc
431 tresol: 1MS
432 tsubresol: 10D
433 varname: sign_d13c
434 d13C_others:
435 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
436 err: 0.4
437 file: others_%Y_LMDz9026vector.nc
438 hresol: regions
439 plugin:
440 name: LMDZ
441 type: fluxes
442 version: sflx
443 regions_infos:
444 dir: ${PYCIF_DATATEST}/LMDZ/
445 file: 10_regions.nc
446 tresol: 1MS
447 tsubresol: 10D
448 varname: sign_d13c
449 d13C_wet:
450 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//signatures/
451 err: 0.4
452 file: wetlands_%Y_LMDz9026vector.nc
453 hresol: regions
454 plugin:
455 name: LMDZ
456 type: fluxes
457 version: sflx
458 regions_infos:
459 dir: ${PYCIF_DATATEST}/LMDZ/
460 file: 10_regions.nc
461 tresol: 1MS
462 tsubresol: 10D
463 varname: sign_d13c
464 kinetic:
465 dir: ${PYCIF_DATATEST}/LMDZ//simple/kinetic/
466 file: TransCom.vmr.new.m%m.nc
467 file_freq: 1MS
468 plugin:
469 name: LMDZ
470 type: fields
471 version: photochem
472 meteo:
473 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//meteo/
474 file_freq: 1MS
475 plugin:
476 name: LMDZ
477 version: mass-fluxes
478 prescrconcs:
479 file_freq: 1MS
480 parameters:
481 Cl:
482 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fields/
483 file: CM5A2CHT_DM_%Y_m%m.nc
484 O1D:
485 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fields/
486 file: CM5A2CHT_DM_%Y_m%m.nc
487 OH:
488 dir: ${PYCIF_DATATEST}/LMDZ//clumped_isotopes//fields/
489 file: CM5A2CHT_DM_%Y_m%m.nc
490 plugin:
491 name: LMDZ
492 type: fields
493 version: prescrconcs
494 plugin:
495 name: standard
496 version: std
497domain:
498 filegrid: ${PYCIF_DATATEST}/LMDZ//grid_LMDZ96_96.txt
499 nlat: 96
500 nlev: 39
501 nlon: 97
502 plugin:
503 name: LMDZ
504 version: std
505 type: deg
506 xmax: 180
507 xmin: -180
508 ymax: 90
509 ymin: -90